KATNBL1

Protein-coding gene in the species Homo sapiens
KATNBL1
Identifiers
AliasesKATNBL1, C15orf29, katanin regulatory subunit B1 like 1
External IDsOMIM: 616235; MGI: 1919675; HomoloGene: 11495; GeneCards: KATNBL1; OMA:KATNBL1 - orthologs
Gene location (Human)
Chromosome 15 (human)
Chr.Chromosome 15 (human)[1]
Chromosome 15 (human)
Genomic location for KATNBL1
Genomic location for KATNBL1
Band15q14Start34,140,674 bp[1]
End34,210,096 bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for KATNBL1
Genomic location for KATNBL1
Band2|2 E3Start112,209,556 bp[2]
End112,244,585 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • vagina

  • tibial nerve

  • amniotic fluid

  • oral cavity

  • sperm

  • rectum

  • skin of abdomen

  • right lung

  • sural nerve

  • left uterine tube
Top expressed in
  • hand

  • secondary oocyte

  • cumulus cell

  • pineal gland

  • epidermis

  • hair follicle

  • otolith organ

  • primitive streak

  • utricle

  • ciliary body
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • protein binding
Cellular component
  • nucleolus
  • spindle pole
  • nucleus
  • cytoplasm
  • cytoskeleton
  • mitotic spindle pole
Biological process
  • positive regulation of cytoskeleton organization
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

79768

72425

Ensembl

ENSG00000134152

ENSMUSG00000027132

UniProt

Q9H079

Q9CWJ3

RefSeq (mRNA)

NM_024713

NM_024254

RefSeq (protein)

NP_078989

NP_077216

Location (UCSC)Chr 15: 34.14 – 34.21 MbChr 2: 112.21 – 112.24 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

KATNBL1 is a protein that in humans is encoded by the KATNBL1 gene.[5][6]


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000134152 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000027132 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Wiemann S, Weil B, Wellenreuther R, Gassenhuber J, Glassl S, Ansorge W, Bocher M, Blocker H, Bauersachs S, Blum H, Lauber J, Dusterhoft A, Beyer A, Kohrer K, Strack N, Mewes HW, Ottenwalder B, Obermaier B, Tampe J, Heubner D, Wambutt R, Korn B, Klein M, Poustka A (Mar 2001). "Toward a Catalog of Human Genes and Proteins: Sequencing and Analysis of 500 Novel Complete Protein Coding Human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  6. ^ "Entrez Gene: C15orf29 chromosome 15 open reading frame 29".

External links

Further reading

  • Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.
  • Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to Biology: A Functional Genomics Pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Simpson JC, Wellenreuther R, Poustka A, et al. (2001). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Rep. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC 1083732. PMID 11256614.
  • Hartley JL, Temple GF, Brasch MA (2001). "DNA Cloning Using In Vitro Site-Specific Recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.


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