NLGN2

Protein-coding gene in the species Homo sapiens
NLGN2
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

3BL8

Identifiers
AliasesNLGN2, neuroligin 2
External IDsOMIM: 606479; MGI: 2681835; HomoloGene: 69317; GeneCards: NLGN2; OMA:NLGN2 - orthologs
Gene location (Human)
Chromosome 17 (human)
Chr.Chromosome 17 (human)[1]
Chromosome 17 (human)
Genomic location for NLGN2
Genomic location for NLGN2
Band17p13.1Start7,404,874 bp[1]
End7,419,860 bp[1]
Gene location (Mouse)
Chromosome 11 (mouse)
Chr.Chromosome 11 (mouse)[2]
Chromosome 11 (mouse)
Genomic location for NLGN2
Genomic location for NLGN2
Band11|11 B3Start69,713,948 bp[2]
End69,728,610 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right hemisphere of cerebellum

  • superior frontal gyrus

  • right ovary

  • primary visual cortex

  • ganglionic eminence

  • body of uterus

  • right frontal lobe

  • stromal cell of endometrium

  • left ovary

  • nucleus accumbens
Top expressed in
  • subiculum

  • dorsomedial hypothalamic nucleus

  • piriform cortex

  • superior colliculus

  • anterior amygdaloid area

  • primary visual cortex

  • internal carotid artery

  • superior frontal gyrus

  • cerebellar cortex

  • cerebellar vermis
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • carboxylic ester hydrolase activity
  • neurexin family protein binding
  • cell adhesion molecule binding
  • signaling receptor activity
  • identical protein binding
Cellular component
  • integral component of membrane
  • postsynaptic membrane
  • membrane
  • synapse
  • inhibitory synapse
  • cell surface
  • cell junction
  • presynaptic membrane
  • plasma membrane
  • integral component of plasma membrane
  • integral component of postsynaptic membrane
  • intracellular anatomical structure
  • spanning component of membrane
  • glycinergic synapse
  • dopaminergic synapse
  • GABA-ergic synapse
  • symmetric, GABA-ergic, inhibitory synapse
  • integral component of postsynaptic specialization membrane
Biological process
  • neuromuscular process controlling balance
  • neuron cell-cell adhesion
  • positive regulation of inhibitory postsynaptic potential
  • synapse organization
  • modulation of chemical synaptic transmission
  • positive regulation of protein localization to synapse
  • gephyrin clustering involved in postsynaptic density assembly
  • postsynaptic density protein 95 clustering
  • positive regulation of synaptic transmission, GABAergic
  • regulation of AMPA receptor activity
  • locomotory exploration behavior
  • regulation of respiratory gaseous exchange by nervous system process
  • cell-cell junction maintenance
  • positive regulation of synaptic vesicle clustering
  • positive regulation of synaptic transmission, glutamatergic
  • cell adhesion
  • positive regulation of excitatory postsynaptic potential
  • sensory perception of pain
  • terminal button organization
  • protein localization to synapse
  • positive regulation of insulin secretion
  • positive regulation of synapse assembly
  • inhibitory synapse assembly
  • synapse assembly
  • synaptic vesicle endocytosis
  • postsynaptic membrane assembly
  • presynaptic membrane assembly
  • cell-cell adhesion
  • postsynaptic specialization assembly
  • presynapse assembly
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

57555

216856

Ensembl

ENSG00000169992
ENSG00000283859

ENSMUSG00000051790

UniProt

Q8NFZ4

Q69ZK9

RefSeq (mRNA)

NM_020795

NM_198862
NM_001364137

RefSeq (protein)

NP_065846

NP_942562
NP_001351066

Location (UCSC)Chr 17: 7.4 – 7.42 MbChr 11: 69.71 – 69.73 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Neuroligin-2 is a protein that in humans is encoded by the NLGN2 gene.[5][6][7]

This gene encodes a member of a family of neuronal cell surface proteins. Members of this family may act as splice site-specific ligands for beta-neurexins and may be involved in the formation and remodeling of central nervous system synapses.[7]

References

  1. ^ a b c ENSG00000283859 GRCh38: Ensembl release 89: ENSG00000169992, ENSG00000283859 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000051790 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Philibert RA, Winfield SL, Sandhu HK, Martin BM, Ginns EI (May 2000). "The structure and expression of the human neuroligin-3 gene". Gene. 246 (1–2): 303–10. doi:10.1016/S0378-1119(00)00049-4. PMID 10767552.
  6. ^ Nagase T, Kikuno R, Ishikawa K, Hirosawa M, Ohara O (Sep 2000). "Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 7 (2): 143–50. doi:10.1093/dnares/7.2.143. PMID 10819331.
  7. ^ a b "Entrez Gene: NLGN2 neuroligin 2".

Further reading

  • Cantallops I, Cline HT (2000). "Synapse formation: if it looks like a duck and quacks like a duck ..." Curr. Biol. 10 (17): R620–3. doi:10.1016/S0960-9822(00)00663-1. PMID 10996085. S2CID 15851386.
  • Ichtchenko K, Nguyen T, Südhof TC (1996). "Structures, alternative splicing, and neurexin binding of multiple neuroligins". J. Biol. Chem. 271 (5): 2676–82. doi:10.1074/jbc.271.5.2676. PMID 8576240.
  • Irie M, Hata Y, Takeuchi M, et al. (1997). "Binding of neuroligins to PSD-95". Science. 277 (5331): 1511–5. doi:10.1126/science.277.5331.1511. PMID 9278515.
  • Kurschner C, Mermelstein PG, Holden WT, Surmeier DJ (1998). "CIPP, a novel multivalent PDZ domain protein, selectively interacts with Kir4.0 family members, NMDA receptor subunits, neurexins, and neuroligins". Mol. Cell. Neurosci. 11 (3): 161–72. doi:10.1006/mcne.1998.0679. PMID 9647694. S2CID 36534759.
  • Nagase T, Kikuno R, Ishikawa KI, et al. (2000). "Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 7 (1): 65–73. doi:10.1093/dnares/7.1.65. PMID 10718198.
  • Scheiffele P, Fan J, Choih J, et al. (2000). "Neuroligin expressed in nonneuronal cells triggers presynaptic development in contacting axons". Cell. 101 (6): 657–69. doi:10.1016/S0092-8674(00)80877-6. PMID 10892652. S2CID 16095623.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Jamain S, Quach H, Betancur C, et al. (2003). "Mutations of the X-linked genes encoding neuroligins NLGN3 and NLGN4 are associated with autism". Nat. Genet. 34 (1): 27–9. doi:10.1038/ng1136. PMC 1925054. PMID 12669065.


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