Ectodysplasin A2 receptor

Protein-coding gene in humans
EDA2R
Identifiers
AliasesEDA2R, EDA-A2R, EDAA2R, TNFRSF27, XEDAR, ectodysplasin A2 receptor
External IDsOMIM: 300276; MGI: 2442860; HomoloGene: 11033; GeneCards: EDA2R; OMA:EDA2R - orthologs
Gene location (Human)
X chromosome (human)
Chr.X chromosome (human)[1]
X chromosome (human)
Genomic location for EDA2R
Genomic location for EDA2R
BandXq12Start66,595,637 bp[1]
End66,639,298 bp[1]
Gene location (Mouse)
X chromosome (mouse)
Chr.X chromosome (mouse)[2]
X chromosome (mouse)
Genomic location for EDA2R
Genomic location for EDA2R
BandX|X C3Start96,377,446 bp[2]
End96,420,822 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • stromal cell of endometrium

  • right adrenal cortex

  • right uterine tube

  • Descending thoracic aorta

  • ascending aorta

  • testicle

  • smooth muscle tissue

  • left adrenal gland

  • canal of the cervix

  • left adrenal cortex
Top expressed in
  • temporal muscle

  • ankle

  • gastrocnemius muscle

  • endothelial cell of lymphatic vessel

  • triceps brachii muscle

  • muscle of thigh

  • quadriceps femoris muscle

  • soleus muscle

  • medial head of gastrocnemius muscle

  • tibialis anterior muscle
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • protein binding
  • tumor necrosis factor-activated receptor activity
  • signaling receptor activity
Cellular component
  • integral component of membrane
  • integral component of plasma membrane
  • intracellular anatomical structure
  • membrane
  • plasma membrane
Biological process
  • multicellular organism development
  • cell differentiation
  • tumor necrosis factor-mediated signaling pathway
  • positive regulation of JNK cascade
  • positive regulation of NF-kappaB transcription factor activity
  • ectodermal cell differentiation
  • intrinsic apoptotic signaling pathway by p53 class mediator
  • epidermis development
  • tissue development
  • positive regulation of I-kappaB kinase/NF-kappaB signaling
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

60401

245527

Ensembl

ENSG00000131080

ENSMUSG00000034457

UniProt

Q9HAV5

Q8BX35

RefSeq (mRNA)
NM_001199687
NM_001199688
NM_001199689
NM_001242310
NM_021783

NM_001324199
NM_001324201
NM_001324202
NM_001324204
NM_001324205
NM_001324206

NM_001161432
NM_001161433
NM_175540

RefSeq (protein)
NP_001186616
NP_001229239
NP_001311128
NP_001311130
NP_001311131

NP_001311133
NP_001311134
NP_001311135
NP_068555

NP_001154904
NP_001154905
NP_780749

Location (UCSC)Chr X: 66.6 – 66.64 MbChr X: 96.38 – 96.42 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Tumor necrosis factor receptor superfamily member 27 is a protein that in humans is encoded by the EDA2R gene.[5][6]

EDA-A1 and EDA-A2 are two isoforms of ectodysplasin that are encoded by the anhidrotic ectodermal dysplasia (EDA) gene. Mutations in EDA give rise to a clinical syndrome characterized by loss of hair, sweat glands, and teeth. The protein encoded by this gene specifically binds to EDA-A2 isoform. This protein is a type III transmembrane protein of the TNFR (tumor necrosis factor receptor) superfamily, and contains 3 cysteine-rich repeats and a single transmembrane domain but lacks an N-terminal signal peptide. Multiple alternatively spliced transcript variants have been found for this gene, but some variants lack sufficient support.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000131080 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000034457 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Yan M, Wang LC, Hymowitz SG, Schilbach S, Lee J, Goddard A, de Vos AM, Gao WQ, Dixit VM (Oct 2000). "Two-amino acid molecular switch in an epithelial morphogen that regulates binding to two distinct receptors". Science. 290 (5491): 523–7. Bibcode:2000Sci...290..523Y. doi:10.1126/science.290.5491.523. PMID 11039935.
  6. ^ a b "Entrez Gene: EDA2R ectodysplasin A2 receptor".

Further reading

  • Hashimoto T, Cui CY, Schlessinger D (2006). "Repertoire of mouse ectodysplasin-A (EDA-A) isoforms". Gene. 371 (1): 42–51. doi:10.1016/j.gene.2005.11.003. PMID 16423472.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Sinha SK, Chaudhary PM (2004). "Induction of apoptosis by X-linked ectodermal dysplasia receptor via a caspase 8-dependent mechanism". J. Biol. Chem. 279 (40): 41873–81. doi:10.1074/jbc.M407363200. PMID 15280356.
  • Clark HF, Gurney AL, Abaya E, et al. (2003). "The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment". Genome Res. 13 (10): 2265–70. doi:10.1101/gr.1293003. PMC 403697. PMID 12975309.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Sinha SK, Zachariah S, Quiñones HI, et al. (2003). "Role of TRAF3 and -6 in the activation of the NF-kappa B and JNK pathways by X-linked ectodermal dysplasia receptor". J. Biol. Chem. 277 (47): 44953–61. doi:10.1074/jbc.M207923200. PMID 12270937.
  • Naito A, Yoshida H, Nishioka E, et al. (2002). "TRAF6-deficient mice display hypohidrotic ectodermal dysplasia". Proc. Natl. Acad. Sci. U.S.A. 99 (13): 8766–71. Bibcode:2002PNAS...99.8766N. doi:10.1073/pnas.132636999. PMC 124373. PMID 12060722.

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