CELSR2

Protein-coding gene in the species Homo sapiens
CELSR2
Identifiers
AliasesCELSR2, CDHF10, EGFL2, Flamingo1, MEGF3, ADGRC2, cadherin EGF LAG seven-pass G-type receptor 2
External IDsOMIM: 604265; MGI: 1858235; HomoloGene: 1078; GeneCards: CELSR2; OMA:CELSR2 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for CELSR2
Genomic location for CELSR2
Band1p13.3Start109,249,539 bp[1]
End109,275,751 bp[1]
Gene location (Mouse)
Chromosome 3 (mouse)
Chr.Chromosome 3 (mouse)[2]
Chromosome 3 (mouse)
Genomic location for CELSR2
Genomic location for CELSR2
Band3 F3|3 47.02 cMStart108,298,167 bp[2]
End108,323,383 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • prefrontal cortex

  • hippocampus proper

  • postcentral gyrus

  • Brodmann area 9

  • superior frontal gyrus

  • entorhinal cortex

  • Region I of hippocampus proper

  • right uterine tube

  • skin of abdomen
Top expressed in
  • superior surface of tongue

  • gallbladder

  • lip

  • subiculum

  • superior frontal gyrus

  • visual cortex

  • motor neuron

  • ascending aorta

  • extensor digitorum longus muscle

  • supraoptic nucleus
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
  • G protein-coupled receptor activity
  • signal transducer activity
  • calcium ion binding
  • transmembrane signaling receptor activity
Cellular component
  • integral component of membrane
  • plasma membrane
  • membrane
  • cytoplasm
Biological process
  • homophilic cell adhesion via plasma membrane adhesion molecules
  • regulation of transcription, DNA-templated
  • cell surface receptor signaling pathway
  • multicellular organism development
  • regulation of cell-cell adhesion
  • Wnt signaling pathway, planar cell polarity pathway
  • G protein-coupled receptor signaling pathway
  • signal transduction
  • neural plate anterior/posterior regionalization
  • Wnt signaling pathway
  • cell adhesion
  • dendrite morphogenesis
  • cell-cell adhesion
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1952

53883

Ensembl

ENSG00000143126

ENSMUSG00000068740

UniProt

Q9HCU4

Q9R0M0

RefSeq (mRNA)

NM_001408

NM_001004177
NM_017392

RefSeq (protein)

NP_001399

NP_001004177
NP_059088

Location (UCSC)Chr 1: 109.25 – 109.28 MbChr 3: 108.3 – 108.32 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Cadherin EGF LAG seven-pass G-type receptor 2 is a protein that in humans is encoded by the CELSR2 gene.[5][6]

The protein encoded by this gene is a member of the flamingo subfamily, part of the cadherin superfamily. The flamingo subfamily consists of nonclassic-type cadherins; a subpopulation that does not interact with catenins. The flamingo cadherins are located at the plasma membrane and have nine cadherin domains, seven epidermal growth factor-like repeats and two laminin A G-type repeats in their ectodomain. They also have seven transmembrane domains, a characteristic unique to this subfamily. It is postulated that these proteins are receptors involved in contact-mediated communication, with cadherin domains acting as homophilic binding regions and the EGF-like domains involved in cell adhesion and receptor-ligand interactions. The specific function of this particular member has not been determined.[6]

See also

  • Flamingo (protein)

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000143126 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000068740 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Nakayama M, Nakajima D, Nagase T, Nomura N, Seki N, Ohara O (Sep 1998). "Identification of high-molecular-weight proteins with multiple EGF-like motifs by motif-trap screening". Genomics. 51 (1): 27–34. doi:10.1006/geno.1998.5341. PMID 9693030.
  6. ^ a b "Entrez Gene: CELSR2 cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)".

Further reading

  • Nagase T, Seki N, Ishikawa K, et al. (1997). "Prediction of the coding sequences of unidentified human genes. VI. The coding sequences of 80 new genes (KIAA0201-KIAA0280) deduced by analysis of cDNA clones from cell line KG-1 and brain". DNA Res. 3 (5): 321–9, 341–54. doi:10.1093/dnares/3.5.321. PMID 9039502.
  • Wu Q, Maniatis T (1999). "A striking organization of a large family of human neural cadherin-like cell adhesion genes". Cell. 97 (6): 779–90. doi:10.1016/S0092-8674(00)80789-8. PMID 10380929. S2CID 6014717.
  • Wu Q, Maniatis T (2000). "Large exons encoding multiple ectodomains are a characteristic feature of protocadherin genes". Proc. Natl. Acad. Sci. U.S.A. 97 (7): 3124–9. doi:10.1073/pnas.060027397. PMC 16203. PMID 10716726.
  • Vincent JB, Skaug J, Scherer SW (2001). "The human homologue of flamingo, EGFL2, encodes a brain-expressed large cadherin-like protein with epidermal growth factor-like domains, and maps to chromosome 1p13.3-p21.1". DNA Res. 7 (3): 233–5. doi:10.1093/dnares/7.3.233. PMID 10907856.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

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